CXXC4-AS1

Across TCGA patient cohorts, CXXC4-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,915 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CXXC4-AS1-associated proteins across cancer lineages are SMARCE1, CAPZA1, and EHD4. Each is linked with CXXC4-AS1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CXXC4-AS1-to-partner and partner-to-CXXC4-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CXXC4-AS1 versus SMARCE1 in HNSC, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CXXC4-AS1→partner) and Y-score (partner→CXXC4-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SMARCE1 →	+0.204	+0.551	<.001	<.001	3	3
GBM	CAPZA1 →	-0.269	-0.165	<.001	.001	3	3
LSCC	EHD4 →	-0.298	-0.491	<.001	<.001	3	3
GBM	FHOD1 →	-0.283	-0.174	<.001	<.001	3	3
LSCC	HSPA4L_T545 →	+0.982	+0.601	<.001	<.001	3	3
GBM	AP4E1 →	-0.200	-0.170	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,915 associations by consensus.

CXXC4-AS1 vs SMARCE1 — HNSC

Explore this scatter interactively →