CXXC4-AS1

associated omics data
CXXC4 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored CXXC4-AS1 profile across patient tissues and cancer cell-line models. CXXC4-AS1 expression is associated with patient survival in 16 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, CXXC4-AS1 is differentially expressed in 8, with the highest sampling consensus in THCA. Additionally, CXXC4-AS1 RNA expression shows 13,682 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight KIRP, THCA, and THYM as cancer lineages where CXXC4-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CXXC4-AS1 survival associations across molecular data types. CXXC4-AS1 RNA expression shows survival associations in the most cancer types (16). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CXXC4-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier16KIRP (59)view →
This table ranks reproducible CXXC4-AS1 RNA expression–survival associations across cancer types. High CXXC4-AS1 expression shows unfavorable associations in KIRP, UCEC and OV, but favorable associations in PAAD, PRAD and LUAD. The KIRP Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for CXXC4-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPOSTertileII,III,IV0.4570.793<.00159view →
UCECDFSTertileIV0.1720.611.00142view →
OVOSTertileAll0.7950.860.00226view →
PAADDFSQuartileAll0.6910.426<.00123view →
PRADDFSQuartileAll0.9280.710.00222view →
LUADDFSTertileAll0.4950.327.00817view →
Pink = unfavorable, green = favorable. all 16 lineages →

CXXC4-AS1-KIRP (OS)

Kaplan–Meier survival curve for CXXC4-AS1 RNA expression in KIRP: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes CXXC4-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in THCA for RNA.
CXXC4-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8THCA (10)view →
This table ranks reproducible tumor–normal expression differences for CXXC4-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CXXC4-AS1 shows lower tumor expression in THCA, COAD, KIRP, KICH and READ and higher tumor expression in KIRC. The THCA box plot shows higher CXXC4-AS1 RNA expression in normal versus tumor tissue (log2 FC = −0.149, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAMaleAll−0.149<.00110view →
COADAllII,III,IV−0.020.0016view →
KIRCAllII,III,IV+0.022.0044view →
KIRPMaleAll−0.014.0384view →
KICHAllAll−0.021.0013view →
READFemaleAll−0.092.0092view →
Green = repressed in tumor. all 8 lineages →

CXXC4-AS1-THCA

Tumor-vs-normal expression box plot for CXXC4-AS1 in THCA.

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Cross-omics associations

This table shows molecular features associated with CXXC4-AS1 in patient tissues and cancer cell lines. In patient samples, CXXC4-AS1 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA13,682THYM (7774)view →
Protein (mass-spec)10,915GBM (3913)view →