CXCR2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CXCR2 mutation is significantly associated with the RNA expression of many other genes, with 995 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CXCR2-associated genes across cancer lineages are GAGE2E, C20orf173, and BTG3P1. Each is linked with CXCR2 in more than 2 cancer types. Because this analysis shows association rather than direction, both CXCR2-to-partner and partner-to-CXCR2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GAGE2E grouped by CXCR2-low versus CXCR2-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CXCR2→partner) and Y-score (partner→CXCR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADGAGE2E →+0.246+4.197<.001.00933
LUADC20orf173 →+0.058+3.336.002.00832
LUADBTG3P1 →+0.051+4.444<.001.00632
LUADKYNUP2 →+0.022+4.315<.001.00732
BRCARN7SL294P →+0.170+7.725<.001<.00132
STADRNU6-865P →+0.282+4.567<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 995 associations by consensus.

GAGE2E by CXCR2 expression — LUAD

Box plot of GAGE2E in CXCR2-low vs CXCR2-high samples in LUAD.

Explore this box plot interactively →

Exploration