CUL4B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CUL4B mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CUL4B-associated genes across cancer lineages are CENPVL1, USP17L20, and USP17L18. Each is linked with CUL4B in more than 1 cancer types. Because this analysis shows association rather than direction, both CUL4B-to-partner and partner-to-CUL4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CENPVL1 grouped by CUL4B-low versus CUL4B-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CUL4B→partner) and Y-score (partner→CUL4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSCENPVL1 →+0.246+4.906<.001.00631
OESOPHAGUSUSP17L20 →+0.050+4.906<.001.00631
OESOPHAGUSUSP17L18 →+0.050+4.906<.001.00631
LUNG_NSCLC_LUADCOX4I2 →+0.095+5.228<.001.00531
LARGE_INTESTINEVAX1 →+0.627+3.519.001.00731
LARGE_INTESTINEMMP26 →+0.033+3.217<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

CENPVL1 by CUL4B expression — OESOPHAGUS

Box plot of CENPVL1 in CUL4B-low vs CUL4B-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration