CTSZ

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CTSZ mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CTSZ-associated genes across cancer lineages are TBC1D3, LRRC74A, and BTBD16. Each is linked with CTSZ in more than 1 cancer types. Because this analysis shows association rather than direction, both CTSZ-to-partner and partner-to-CTSZ results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TBC1D3 grouped by CTSZ-low versus CTSZ-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CTSZ→partner) and Y-score (partner→CTSZ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETBC1D3 →+0.080+4.273<.001.00631
BLOOD_LeukemiaLRRC74A →+0.020+3.551.007.00931
BLOOD_LeukemiaBTBD16 →+0.134+3.959<.001.00531
BLOOD_LeukemiaVWC2L →+0.012+4.339<.001.00231
BLOOD_LeukemiaFAM216B →+0.146+3.944<.001.00631
BLOOD_LeukemiaRXFP3 →+0.010+3.874<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

TBC1D3 by CTSZ expression — LARGE_INTESTINE

Box plot of TBC1D3 in CTSZ-low vs CTSZ-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration