CSNK2A3

Across TCGA patient cohorts, CSNK2A3 mutation is significantly associated with the RNA expression of many other genes, with 3,546 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CSNK2A3-associated genes across cancer lineages are VN1R93P, RN7SKP186, and RNU6ATAC2P. Each is linked with CSNK2A3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CSNK2A3-to-partner and partner-to-CSNK2A3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VN1R93P grouped by CSNK2A3-low versus CSNK2A3-high in BLCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSNK2A3→partner) and Y-score (partner→CSNK2A3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLCA	VN1R93P →	+0.090	+4.883	.003	.002	3	2
SKCM	RN7SKP186 →	+0.178	+4.771	<.001	.006	3	2
STAD	RNU6ATAC2P →	+0.340	+3.804	.008	.009	3	2
STAD	SNRPGP7 →	+0.543	+4.565	<.001	.001	3	2
LUAD	COPRSP1 →	+0.159	+4.481	<.001	.005	3	2
UCEC	SRP72P1 →	+0.117	+2.003	<.001	.003	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,546 associations by consensus.

VN1R93P by CSNK2A3 expression — BLCA

Explore this box plot interactively →