CSMD3

Across TCGA patient cohorts, CSMD3 protein abundance is significantly associated with the RNA expression of many other genes, with 2,438 significant associations in total. COAD shows the largest number of these associations.

The most reproducible CSMD3-associated genes across cancer lineages are SUSD6, ELK3, and NLRC5. Each is linked with CSMD3 in more than 1 cancer types. Because this analysis shows association rather than direction, both CSMD3-to-partner and partner-to-CSMD3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSMD3 versus SUSD6 in COAD, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CSMD3→partner) and Y-score (partner→CSMD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SUSD6 →	-0.776	-0.362	.001	.009	3	2
COAD	ELK3 →	-0.703	-0.426	.002	.003	3	2
COAD	NLRC5 →	-1.200	-0.552	<.001	<.001	3	2
COAD	GPR107 →	-0.809	-0.503	.001	.005	3	2
COAD	IFI16 →	-0.987	-0.438	.006	.009	3	2
COAD	CIITA →	-1.217	-0.473	.001	.007	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,438 associations by consensus.

CSMD3 vs SUSD6 — COAD

Explore this scatter interactively →