CSE1L

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CSE1L RNA expression is significantly associated with the protein abundance of many other proteins, with 22,060 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CSE1L-associated proteins across cancer lineages are ADNP, SMC2, and SMC4. Each is linked with CSE1L in more than 9 cancer types. Because this analysis shows association rather than direction, both CSE1L-to-partner and partner-to-CSE1L results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CSE1L versus ADNP in GBM, with a Pearson correlation of 0.74.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CSE1L→partner) and Y-score (partner→CSE1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMADNP →+0.446+0.538<.001<.001310
UCECSMC2 →+0.718+0.801<.001<.00139
UCECSMC4 →+0.661+0.805<.001<.00139
OVTOP1 →+0.378+0.597<.001<.00139
LUADTOP2A →+0.935+0.566<.001<.00139
LUADTOP2A_S1106 →+1.144+0.518<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,060 associations by consensus.

CSE1L vs ADNP — GBM

Per-sample scatter of CSE1L vs ADNP in GBM (Pearson r = 0.74).

Explore this scatter interactively →

Exploration