CRABP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CRABP1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,468 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CRABP1-associated genes across cancer lineages are PRKAR2B, CARM1P1, and SOX10. Each is linked with CRABP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CRABP1-to-partner and partner-to-CRABP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CRABP1 versus PRKAR2B in COAD, with a Pearson correlation of 0.31.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CRABP1→partner) and Y-score (partner→CRABP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPRKAR2B →+0.858+0.668.001.00334
OVCARM1P1 →+0.573+1.432.003.00234
BRCASOX10 →+2.403+1.596<.001<.00133
BRCASFRP1 →+2.124+1.342<.001<.00133
COADBAG2 →+1.137+0.710<.001<.00133
HNSCMASP1 →+0.834+0.905<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,468 associations by consensus.

CRABP1 vs PRKAR2B — COAD

Per-sample scatter of CRABP1 vs PRKAR2B in COAD (Pearson r = 0.31).

Explore this scatter interactively →

Exploration