CPNE7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPNE7 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,694 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CPNE7-associated proteins across cancer lineages are ABLIM2_S364, PLPP3, and PDIA4. Each is linked with CPNE7 in more than 4 cancer types. Because this analysis shows association rather than direction, both CPNE7-to-partner and partner-to-CPNE7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPNE7 versus ABLIM2_S364 in PDAC, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE7→partner) and Y-score (partner→CPNE7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACABLIM2_S364 →+1.047+0.756<.001.00135
UCECPLPP3 →-0.898-1.378<.001<.00134
LUADPDIA4 →-0.400-1.247<.001<.00134
LUADANKRD17_S2401 →-0.428-0.895.002<.00134
LUADEEF1A2 →+1.250+0.979<.001<.00134
LSCCPHLDB1 →-0.420-1.200<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,694 associations by consensus.

CPNE7 vs ABLIM2_S364 — PDAC

Per-sample scatter of CPNE7 vs ABLIM2_S364 in PDAC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration