CPNE6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPNE6 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,602 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CPNE6-associated proteins across cancer lineages are ANXA1, PPFIBP1_S579, and ASPSCR1. Each is linked with CPNE6 in more than 4 cancer types. Because this analysis shows association rather than direction, both CPNE6-to-partner and partner-to-CPNE6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPNE6 versus ANXA1 in UCEC, with a Pearson correlation of -0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CPNE6→partner) and Y-score (partner→CPNE6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECANXA1 →-0.772-0.511<.001.00135
GBMPPFIBP1_S579 →-0.312-0.851<.001<.00134
LUADASPSCR1 →+0.236+0.135<.001.00433
LUADBCAR1 →-0.237-0.289.001.00233
HNSCFAM83H →-0.534-0.247<.001.00533
HNSCRCOR3 →+0.420+0.191<.001<.00124
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,602 associations by consensus.

CPNE6 vs ANXA1 — UCEC

Per-sample scatter of CPNE6 vs ANXA1 in UCEC (Pearson r = -0.34).

Explore this scatter interactively →

Exploration