CPEB4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CPEB4 protein abundance is significantly associated with the RNA expression of many other genes, with 13,561 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CPEB4-associated genes across cancer lineages are TMEM237, ZNF670, and LYRM4. Each is linked with CPEB4 in more than 5 cancer types. Because this analysis shows association rather than direction, both CPEB4-to-partner and partner-to-CPEB4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CPEB4 versus TMEM237 in HNSC, with a Pearson correlation of -0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CPEB4→partner) and Y-score (partner→CPEB4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTMEM237 →-0.706-0.406.003.00136
HNSCZNF670 →-0.722-0.470.002<.00135
HNSCLYRM4 →-0.753-0.336.002.00735
HNSCHMGXB4 →-0.575-0.416.001<.00134
HNSCBABAM1 →-0.416-0.220.004.00334
HNSCFOXM1 →-1.223-0.600<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,561 associations by consensus.

CPEB4 vs TMEM237 — HNSC

Per-sample scatter of CPEB4 vs TMEM237 in HNSC (Pearson r = -0.43).

Explore this scatter interactively →

Exploration