COL6A4P1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, COL6A4P1 mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible COL6A4P1-associated genes across cancer lineages are p27_pT157, eIF4E, and GATA6. Each is linked with COL6A4P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both COL6A4P1-to-partner and partner-to-COL6A4P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p27_pT157 grouped by COL6A4P1-low versus COL6A4P1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (COL6A4P1→partner) and Y-score (partner→COL6A4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp27_pT157 →-0.088-3.169.005.02031
UCECeIF4E →+0.312+3.169.007.02021
UCECGATA6 →-0.217-2.992.015.03621
UCECACVRL1 →-0.234-2.980.001.03621
UCECMEK1 →+0.544+3.169.006.02021
UCECp70-S6K_pT389 →-0.304-3.169.003.02021
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

p27_pT157 by COL6A4P1 expression — UCEC

Box plot of p27_pT157 in COL6A4P1-low vs COL6A4P1-high samples in UCEC.

Explore this box plot interactively →

Exploration