CNTN4

Across TCGA patient cohorts, CNTN4 protein abundance is significantly associated with the RNA expression of many other genes, with 3,341 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CNTN4-associated genes across cancer lineages are PLSCR4, PRRG1, and SHISAL1. Each is linked with CNTN4 in more than 2 cancer types. Because this analysis shows association rather than direction, both CNTN4-to-partner and partner-to-CNTN4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNTN4 versus PLSCR4 in BRCA, with a Pearson correlation of 0.56.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNTN4→partner) and Y-score (partner→CNTN4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PLSCR4 →	+1.889	+0.592	.001	.002	3	3
BRCA	PRRG1 →	+0.943	+0.494	.004	.005	3	3
GBM	SHISAL1 →	+1.041	+0.419	.001	.001	3	3
BRCA	OSMR →	+1.396	+0.732	.001	<.001	3	3
GBM	PRDM8 →	+0.734	+0.314	<.001	.002	3	3
BRCA	MMP16 →	+1.505	+0.638	<.001	.002	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,341 associations by consensus.

CNTN4 vs PLSCR4 — BRCA

Explore this scatter interactively →