CNIH3-AS2

Across TCGA patient cohorts, CNIH3-AS2 RNA expression is significantly associated with the RNA expression of many other genes, with 12,019 significant associations in total. THYM shows the largest number of these associations.

The most reproducible CNIH3-AS2-associated genes across cancer lineages are CNIH3, LGALS1, and TMEM158. Each is linked with CNIH3-AS2 in more than 27 cancer types. Because this analysis shows association rather than direction, both CNIH3-AS2-to-partner and partner-to-CNIH3-AS2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CNIH3-AS2 versus CNIH3 in SKCM, with a Pearson correlation of 0.77.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CNIH3-AS2→partner) and Y-score (partner→CNIH3-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	CNIH3 →	+2.208	+2.445	<.001	<.001	3	28
THCA	LGALS1 →	+1.134	+0.431	<.001	<.001	3	23
MESO	TMEM158 →	+1.725	+1.327	<.001	<.001	3	22
SKCM	LINC02813 →	+0.777	+1.982	<.001	<.001	3	22
SARC	LINC01711 →	+1.731	+1.415	<.001	<.001	3	21
UVM	FKBP10 →	+1.095	+0.573	<.001	<.001	3	21

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,019 associations by consensus.

CNIH3-AS2 vs CNIH3 — SKCM

Explore this scatter interactively →