CNIH3-AS1

associated omics data
CNIH3 antisense RNA 1Genealiases: []

Q-omics provides the consensus-scored CNIH3-AS1 profile across patient tissues and cancer cell-line models. CNIH3-AS1 expression is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, CNIH3-AS1 is differentially expressed in 3, with the highest sampling consensus in HNSC. Additionally, CNIH3-AS1 RNA expression shows 11,201 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight UVM, HNSC, and GBM as cancer lineages where CNIH3-AS1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CNIH3-AS1 survival associations across molecular data types. CNIH3-AS1 RNA expression shows survival associations in the most cancer types (28). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CNIH3-AS1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier28UVM (141)view →
This table ranks reproducible CNIH3-AS1 RNA expression–survival associations across cancer types. High CNIH3-AS1 expression shows unfavorable associations in UVM, KIRC, UCS, KICH and THYM, but favorable associations in OV. The UVM Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for CNIH3-AS1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSTertileAll0.3400.710<.001141view →
KIRCDFSTertileAll0.4640.667<.001116view →
UCSOSQuartileII,III,IV0.1700.602<.001108view →
KICHOSTertileII,III,IV0.6530.967<.00178view →
THYMDFSTertileAll0.6520.914<.00151view →
OVOSMedianIV0.5350.289.00650view →
Pink = unfavorable, green = favorable. all 28 lineages →

CNIH3-AS1-UVM (DFS)

Kaplan–Meier survival curve for CNIH3-AS1 RNA expression in UVM: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes CNIH3-AS1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 3. The strongest signals are observed in HNSC for RNA.
CNIH3-AS1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot3HNSC (8)view →
This table ranks reproducible tumor–normal expression differences for CNIH3-AS1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CNIH3-AS1 shows higher tumor expression in HNSC, LUSC and LUAD. The HNSC box plot shows higher CNIH3-AS1 RNA expression in tumor versus normal tissue (log2 FC = +0.147, t-test p = .011).
LineageGenderStageFold-changepSampling consensus
HNSCAllII,III,IV+0.147.0118view →
LUSCMaleAll+0.427<.0015view →
LUADFemaleAll+0.102.0312view →
Green = repressed in tumor. all 3 lineages →

CNIH3-AS1-HNSC

Tumor-vs-normal expression box plot for CNIH3-AS1 in HNSC.

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Cross-omics associations

This table shows molecular features associated with CNIH3-AS1 in patient tissues and cancer cell lines. In patient samples, CNIH3-AS1 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)11,201GBM (3531)view →
RNA9,420UVM (5005)view →