CLEC18B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CLEC18B mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CLEC18B-associated genes across cancer lineages are ACER1, OR2C1, and H1-6. Each is linked with CLEC18B in more than 1 cancer types. Because this analysis shows association rather than direction, both CLEC18B-to-partner and partner-to-CLEC18B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACER1 grouped by CLEC18B-low versus CLEC18B-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLEC18B→partner) and Y-score (partner→CLEC18B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEACER1 →+0.085+4.145.002.00131
LARGE_INTESTINEOR2C1 →+0.105+3.578.001.00631
LARGE_INTESTINEH1-6 →+0.117+3.509<.001.00831
LARGE_INTESTINEADAM7 →+0.004+3.345<.001.00731
LUNG_SCLCMAGEB3 →+0.150+4.044<.001.00931
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

ACER1 by CLEC18B expression — LARGE_INTESTINE

Box plot of ACER1 in CLEC18B-low vs CLEC18B-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration