CLASRP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CLASRP mutation is significantly associated with the RNA expression of many other genes, with 3,268 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CLASRP-associated genes across cancer lineages are RNU6-468P, RNA5SP120, and MTCO2P23. Each is linked with CLASRP in more than 1 cancer types. Because this analysis shows association rather than direction, both CLASRP-to-partner and partner-to-CLASRP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-468P grouped by CLASRP-low versus CLASRP-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CLASRP→partner) and Y-score (partner→CLASRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRNU6-468P →+0.215+4.821<.001.00332
LUADRNA5SP120 →+0.361+4.859<.001.00432
LUADMTCO2P23 →+0.034+4.612<.001.00632
HNSCMIR4757 →+0.285+4.526<.001.00732
CESCRN7SKP263 →+0.098+4.984<.001.00332
SKCMRNU6-514P →+0.281+3.508<.001.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,268 associations by consensus.

RNU6-468P by CLASRP expression — COAD

Box plot of RNU6-468P in CLASRP-low vs CLASRP-high samples in COAD.

Explore this box plot interactively →

Exploration