CKS1B

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CKS1B RNA expression is significantly associated with the protein abundance of many other proteins, with 22,395 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CKS1B-associated proteins across cancer lineages are MCM2, MCM3, and MCM4. Each is linked with CKS1B in more than 9 cancer types. Because this analysis shows association rather than direction, both CKS1B-to-partner and partner-to-CKS1B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CKS1B versus MCM2 in OV, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CKS1B→partner) and Y-score (partner→CKS1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMCM2 →+0.727+0.598<.001.001310
OVMCM3 →+0.972+0.665<.001<.001310
OVMCM4 →+0.828+0.719<.001<.001310
OVMCM5 →+0.773+0.761<.001<.001310
GBMMCM6 →+0.847+0.523<.001<.001310
OVMCM7 →+0.852+0.783<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,395 associations by consensus.

CKS1B vs MCM2 — OV

Per-sample scatter of CKS1B vs MCM2 in OV (Pearson r = 0.36).

Explore this scatter interactively →

Exploration