CKAP2L

Across TCGA patient cohorts, CKAP2L mutation is significantly associated with the RNA expression of many other genes, with 873 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CKAP2L-associated genes across cancer lineages are LINC01072, LINC02151, and KRTAP12-6P. Each is linked with CKAP2L in more than 1 cancer types. Because this analysis shows association rather than direction, both CKAP2L-to-partner and partner-to-CKAP2L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC01072 grouped by CKAP2L-low versus CKAP2L-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CKAP2L→partner) and Y-score (partner→CKAP2L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	LINC01072 →	+0.147	+4.345	<.001	.002	3	2
CESC	LINC02151 →	+0.057	+4.595	<.001	.001	3	2
CESC	KRTAP12-6P →	+0.086	+5.579	<.001	.001	3	2
CESC	MIR8053 →	+0.300	+4.757	<.001	.004	3	2
SKCM	ELOAP1 →	+0.005	+4.025	<.001	.007	3	2
SKCM	ACTG1P13 →	+0.027	+3.245	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 873 associations by consensus.

LINC01072 by CKAP2L expression — CESC

Explore this box plot interactively →