CHST8

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHST8 mutation is significantly associated with the RNA expression of many other genes, with 908 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHST8-associated genes across cancer lineages are RNU6-1318P, RN7SL591P, and SFRP5. Each is linked with CHST8 in more than 2 cancer types. Because this analysis shows association rather than direction, both CHST8-to-partner and partner-to-CHST8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1318P grouped by CHST8-low versus CHST8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHST8→partner) and Y-score (partner→CHST8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNU6-1318P →+0.231+2.358<.001.00433
COADRN7SL591P →+0.239+4.392.001.00633
UCECSFRP5 →-0.902-3.574.005.00233
STADRNU6-13P →+0.439+2.823.001.00633
SARCRN7SL447P →+0.282+5.345<.001.00533
SKCMRNU1-73P →+0.277+3.273<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 908 associations by consensus.

RNU6-1318P by CHST8 expression — UCEC

Box plot of RNU6-1318P in CHST8-low vs CHST8-high samples in UCEC.

Explore this box plot interactively →

Exploration