CHPF

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CHPF RNA expression is significantly associated with the go_rna of many other GO terms, with 5,371 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CHPF-associated GO terms across cancer lineages are Negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway, Negative regulation of response to endoplasmic reticulum stress, and Response to unfolded protein. Each is linked with CHPF in more than 16 cancer types. Because this analysis shows association rather than direction, both CHPF-to-partner and partner-to-CHPF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway grouped by CHPF-low versus CHPF-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CHPF→partner) and Y-score (partner→CHPF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENegative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway →+0.194+1.808<.001<.001317
BONENegative regulation of response to endoplasmic reticulum stress →+0.122+2.072<.001<.001317
BLOOD_MyelomaResponse to unfolded protein →+0.104+1.647<.001<.001316
BONEViral process →+0.094+2.109<.001<.001316
BONEViral gene expression →+0.107+2.150<.001<.001315
SOFT_TISSUEMulti-pass transmembrane protein insertion into ER membrane →+0.110+1.749<.001<.001315
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,371 associations by consensus.

Negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway by CHPF expression — BONE

Box plot of Negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway in CHPF-low vs CHPF-high samples in BONE.

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