CHN1

Across TCGA patient cohorts, CHN1 protein abundance is significantly associated with the RNA expression of many other genes, with 7,682 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHN1-associated genes across cancer lineages are LDB2, CDH5, and C2CD4B. Each is linked with CHN1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CHN1-to-partner and partner-to-CHN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHN1 versus LDB2 in CCRCC, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHN1→partner) and Y-score (partner→CHN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	LDB2 →	+1.191	+0.588	.007	<.001	3	4
CCRCC	CDH5 →	+0.951	+0.530	.007	.001	3	4
LUAD	C2CD4B →	+1.134	+0.435	<.001	<.001	3	4
LSCC	TMOD2 →	+0.656	+0.385	<.001	<.001	3	4
LSCC	FAM107A →	+1.142	+0.400	<.001	<.001	3	4
CCRCC	CRACDL →	+0.683	+0.428	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,682 associations by consensus.

CHN1 vs LDB2 — CCRCC

Explore this scatter interactively →