CHN1

Across TCGA cell cohorts, CHN1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,436 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CHN1-associated GO terms across cancer lineages are Nuclear transport, Nucleocytoplasmic transport, and DNA biosynthetic process. Each is linked with CHN1 in more than 13 cancer types. Because this analysis shows association rather than direction, both CHN1-to-partner and partner-to-CHN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nuclear transport grouped by CHN1-low versus CHN1-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CHN1→partner) and Y-score (partner→CHN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PANCREAS	Nuclear transport →	+0.086	+1.723	<.001	<.001	3	14
PANCREAS	Nucleocytoplasmic transport →	+0.060	+1.082	<.001	<.001	3	14
PANCREAS	DNA biosynthetic process →	+0.091	+1.393	<.001	<.001	3	13
OVARY	Protein localization to nucleus →	+0.065	+2.537	<.001	<.001	3	13
OESOPHAGUS	Microtubule polymerization or depolymerization →	+0.140	+1.738	.003	<.001	3	13
OVARY	Regulation of microtubule-based process →	+0.054	+2.435	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,436 associations by consensus.

Nuclear transport by CHN1 expression — PANCREAS

Explore this box plot interactively →