CHMP4B

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHMP4B mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CHMP4B-associated genes across cancer lineages are MEK1, p62 Lck ligand, and Caspase-7-cleavedD198. Each is linked with CHMP4B in more than 1 cancer types. Because this analysis shows association rather than direction, both CHMP4B-to-partner and partner-to-CHMP4B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MEK1 grouped by CHMP4B-low versus CHMP4B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CHMP4B→partner) and Y-score (partner→CHMP4B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMEK1 →+0.521+3.000.006.03631
UCECp62 Lck ligand →+0.352+3.321.039.01031
UCECCaspase-7-cleavedD198 →+1.034+3.019<.001.01931
UCECSTAT3_pY705 →-0.458-2.990<.001.03621
UCECMSH2 →-0.314-3.321.009.01011
UCECMSH6 →-0.553-3.321.001.01011
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

MEK1 by CHMP4B expression — UCEC

Box plot of MEK1 in CHMP4B-low vs CHMP4B-high samples in UCEC.

Explore this box plot interactively →

Exploration