CHL1-AS1

Across TCGA patient cohorts, CHL1-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,987 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHL1-AS1-associated proteins across cancer lineages are CHL1, CHL1_S1127, and CHL1_S1150. Each is linked with CHL1-AS1 in more than 6 cancer types. Because this analysis shows association rather than direction, both CHL1-AS1-to-partner and partner-to-CHL1-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CHL1-AS1 versus CHL1 in LSCC, with a Pearson correlation of 0.83.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHL1-AS1→partner) and Y-score (partner→CHL1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CHL1 →	+0.967	+0.998	<.001	<.001	3	7
LSCC	CHL1_S1127 →	+1.377	+1.015	<.001	<.001	3	7
LSCC	CHL1_S1150 →	+2.022	+1.296	<.001	<.001	3	4
GBM	OPTN →	-0.571	-0.972	<.001	<.001	3	3
LSCC	RNF180_S230 →	+0.646	+0.657	.001	.002	3	3
LSCC	LRP1 →	+0.374	+0.727	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 9,987 associations by consensus.

CHL1-AS1 vs CHL1 — LSCC

Explore this scatter interactively →