CHKB-DT

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CHKB-DT RNA expression is significantly associated with the protein abundance of many other proteins, with 11,053 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CHKB-DT-associated proteins across cancer lineages are TCF20, PARP4_S1722, and IFT27. Each is linked with CHKB-DT in more than 3 cancer types. Because this analysis shows association rather than direction, both CHKB-DT-to-partner and partner-to-CHKB-DT results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CHKB-DT→partner) and Y-score (partner→CHKB-DT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTCF20 →+0.240+0.474.001<.00134
GBMPARP4_S1722 →-0.871-0.566<.001<.00134
OVIFT27 →+0.441+0.471.009.00434
GBMDAB2 →-0.678-0.473<.001<.00134
LSCCDHFR →+0.797+0.691<.001<.00134
GBMEHD1 →-0.232-0.355.004.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,053 associations by consensus.

Exploration