CHKB-DT

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, CHKB-DT RNA is linked to patient survival in 28 of 34 cancer types, making it the most broadly survival-associated CHKB-DT data layer.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where higher CHKB-DT RNA is associated with worse disease-free survival. In most high-consensus cancer types, elevated CHKB-DT expression acts as an unfavorable survival marker, although some lineages such as ESCA and PAAD show a favorable association.

KIRC, LIHC, and UVM are the cancer types where CHKB-DT RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSQuartileIV0.2040.546<.00169view →
LIHCDFSTertileAll0.3520.628<.00139view →
UVMOSMedianIII,IV0.3820.867.00128view →
ESCADFSTertileAll0.9080.427.01024view →
UCSOSMedianIV0.4040.752.01318view →
ACCOSMedianAll0.4730.775.01217view →
STADOSQuartileIV0.1340.737.00615view →
KICHOSQuartileII,III,IV0.5280.927.02514view →
THYMDFSMedianAll0.6500.968.00413view →
SKCMOSQuartileII,III,IV0.2740.544.01612view →
PAADDFSMedianAll0.3630.187.00912view →
READDFSTertileIII,IV0.8620.265.00612view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 28 lineages.

Exploration