CGRRF1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CGRRF1 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CGRRF1-associated genes across cancer lineages are AMELX and MYMK. Each is linked with CGRRF1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CGRRF1-to-partner and partner-to-CGRRF1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AMELX grouped by CGRRF1-low versus CGRRF1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CGRRF1→partner) and Y-score (partner→CGRRF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaAMELX →+0.045+5.539<.001.00331
BLOOD_LeukemiaMYMK →+0.031+4.922<.001.00931
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

AMELX by CGRRF1 expression — BLOOD_Leukemia

Box plot of AMELX in CGRRF1-low vs CGRRF1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration