CENPT

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CENPT protein abundance is significantly associated with the RNA expression of many other genes, with 9,953 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CENPT-associated genes across cancer lineages are RUBCNL, IL1R1, and CDCA7. Each is linked with CENPT in more than 2 cancer types. Because this analysis shows association rather than direction, both CENPT-to-partner and partner-to-CENPT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CENPT versus RUBCNL in HNSC, with a Pearson correlation of -0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CENPT→partner) and Y-score (partner→CENPT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRUBCNL →-0.912-0.324<.001.00333
CCRCCIL1R1 →-1.104-1.644.004<.00133
BRCACDCA7 →+1.739+0.574<.001<.00133
HNSCCDCA2 →+1.632+0.567<.001<.00133
HNSCE2F4 →+1.139+0.347.007.00933
HNSCCTSO →-0.686-0.404<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,953 associations by consensus.

CENPT vs RUBCNL — HNSC

Per-sample scatter of CENPT vs RUBCNL in HNSC (Pearson r = -0.43).

Explore this scatter interactively →

Exploration