CEBPB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CEBPB protein abundance is significantly associated with the RNA expression of many other genes, with 19,170 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CEBPB-associated genes across cancer lineages are CHI3L1, GPR84, and S100A9. Each is linked with CEBPB in more than 7 cancer types. Because this analysis shows association rather than direction, both CEBPB-to-partner and partner-to-CEBPB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CEBPB versus CHI3L1 in GBM, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CEBPB→partner) and Y-score (partner→CEBPB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCHI3L1 →+2.087+0.373<.001<.00138
GBMGPR84 →+1.094+0.438<.001<.00138
LSCCS100A9 →+2.490+0.367<.001<.00138
GBMFPR2 →+1.415+0.584<.001<.00138
GBMSLC11A1 →+1.435+0.543<.001<.00138
GBMPELATON →+0.740+0.425<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,170 associations by consensus.

CEBPB vs CHI3L1 — GBM

Per-sample scatter of CEBPB vs CHI3L1 in GBM (Pearson r = 0.51).

Explore this scatter interactively →

Exploration