CDKN2AIPNL

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDKN2AIPNL mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CDKN2AIPNL-associated genes across cancer lineages are FAM27B, LILRP1, and RN7SKP214. Each is linked with CDKN2AIPNL in more than 1 cancer types. Because this analysis shows association rather than direction, both CDKN2AIPNL-to-partner and partner-to-CDKN2AIPNL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM27B grouped by CDKN2AIPNL-low versus CDKN2AIPNL-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDKN2AIPNL→partner) and Y-score (partner→CDKN2AIPNL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFAM27B →+0.131+4.453<.001.00632
UCECLILRP1 →+0.205+3.718<.001.00631
UCECRN7SKP214 →+0.323+3.334.003.00831
UCECRNU6-206P →+0.372+5.245<.001.00231
UCECRNU6-906P →+0.623+3.671<.001.00331
UCECTRGV9 →+0.140+3.641<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

FAM27B by CDKN2AIPNL expression — UCEC

Box plot of FAM27B in CDKN2AIPNL-low vs CDKN2AIPNL-high samples in UCEC.

Explore this box plot interactively →

Exploration