CDH16

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CDH16 mutation is significantly associated with the RNA expression of many other genes, with 565 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CDH16-associated genes across cancer lineages are ABHD17B, OR9G1, and HSF2. Each is linked with CDH16 in more than 1 cancer types. Because this analysis shows association rather than direction, both CDH16-to-partner and partner-to-CDH16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ABHD17B grouped by CDH16-low versus CDH16-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CDH16→partner) and Y-score (partner→CDH16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaABHD17B →+0.938+3.260.007.00532
BLOOD_LeukemiaOR9G1 →+0.120+2.704<.001.00532
BLOOD_LeukemiaHSF2 →+0.597+3.199.006.00732
BLOOD_LeukemiaHSD17B6 →+1.003+3.199<.001.00732
BLOOD_LeukemiaFAM240A →+0.010+2.979.001.00732
LARGE_INTESTINEPDP2 →+0.675+3.212.005.00632
Each partner links to its Q-omics profile. Showing the 6 strongest of 565 associations by consensus.

ABHD17B by CDH16 expression — BLOOD_Leukemia

Box plot of ABHD17B in CDH16-low vs CDH16-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration