CDA

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CDA RNA expression is significantly associated with the protein abundance of many other proteins, with 12,459 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CDA-associated proteins across cancer lineages are PLEC, PARP1, and PLEC_S1284. Each is linked with CDA in more than 5 cancer types. Because this analysis shows association rather than direction, both CDA-to-partner and partner-to-CDA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CDA versus PLEC in LSCC, with a Pearson correlation of 0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CDA→partner) and Y-score (partner→CDA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPLEC →+0.380+0.784<.001.00436
OVPARP1 →-0.612-0.782<.001.00335
LSCCPLEC_S1284 →+1.076+1.235<.001<.00135
LSCCPLEC_S1435 →+1.076+1.235<.001<.00135
OVPLEC_T2735 →+0.748+0.979<.001<.00135
OVPLEC_T2886 →+0.748+0.979<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,459 associations by consensus.

CDA vs PLEC — LSCC

Per-sample scatter of CDA vs PLEC in LSCC (Pearson r = 0.29).

Explore this scatter interactively →

Exploration