CCNA2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCNA2 mutation is significantly associated with the RNA expression of many other genes, with 4,217 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCNA2-associated genes across cancer lineages are TRIM51HP, RNA5SP312, and BRWD1P1. Each is linked with CCNA2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCNA2-to-partner and partner-to-CCNA2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TRIM51HP grouped by CCNA2-low versus CCNA2-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCNA2→partner) and Y-score (partner→CCNA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCATRIM51HP →+1.035+4.797<.001.00532
BLCARNA5SP312 →+0.237+7.640<.001.00932
COADBRWD1P1 →+0.506+5.516<.001.00432
LUSCRNU4-58P →+0.397+6.733<.001<.00132
LUSCRNU6-1338P →+0.530+5.151<.001.00732
BRCASEBOX →+0.263+3.954<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,217 associations by consensus.

TRIM51HP by CCNA2 expression — BRCA

Box plot of TRIM51HP in CCNA2-low vs CCNA2-high samples in BRCA.

Explore this box plot interactively →

Exploration