CCDC96

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC96 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,595 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible CCDC96-associated proteins across cancer lineages are TPPP3, DNALI1, and TTC21B. Each is linked with CCDC96 in more than 5 cancer types. Because this analysis shows association rather than direction, both CCDC96-to-partner and partner-to-CCDC96 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC96 versus TPPP3 in UCEC, with a Pearson correlation of 0.71.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC96→partner) and Y-score (partner→CCDC96) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTPPP3 →+1.805+1.135<.001<.00136
BRCADNALI1 →+1.015+1.057<.001<.00136
UCECTTC21B →+0.316+0.832<.001<.00135
UCECTTC26 →+0.462+1.004<.001<.00135
BRCAUBXN10_S87 →+1.054+1.277<.001<.00135
UCECWDR19 →+0.464+1.228<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,595 associations by consensus.

CCDC96 vs TPPP3 — UCEC

Per-sample scatter of CCDC96 vs TPPP3 in UCEC (Pearson r = 0.71).

Explore this scatter interactively →

Exploration