CCDC96

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC96 protein abundance is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC96-associated genes across cancer lineages are FAM86MP, VIL1, and RNY1. Each is linked with CCDC96 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC96-to-partner and partner-to-CCDC96 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC96 versus FAM86MP in UCEC, with a Pearson correlation of -0.58.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC96→partner) and Y-score (partner→CCDC96) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFAM86MP →-1.330-0.414.006.00921
UCECVIL1 →-2.245-0.414.005.00911
UCECRNY1 →+0.925+0.414.001.00911
UCECLBH →-0.595-0.414.003.00911
UCECMRPL15P1 →-1.075-0.513.002.00911
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

CCDC96 vs FAM86MP — UCEC

Per-sample scatter of CCDC96 vs FAM86MP in UCEC (Pearson r = -0.58).

Explore this scatter interactively →

Exploration