CCDC83

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC83 mutation is significantly associated with the total protein of many other genes, with 29 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC83-associated genes across cancer lineages are Cyclin-E2, 14-3-3_beta, and EGFR_pY1068. Each is linked with CCDC83 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC83-to-partner and partner-to-CCDC83 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cyclin-E2 grouped by CCDC83-low versus CCDC83-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC83→partner) and Y-score (partner→CCDC83) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCyclin-E2 →+0.176+2.331.004.00333
UCEC14-3-3_beta →-0.077-2.432.036.01831
UCECEGFR_pY1068 →-0.215-2.584.019.01031
UCECeIF4G →+0.257+1.847.024.00831
UCECFoxM1 →+0.292+2.736.002<.00122
UCECACVRL1 →-0.116-1.787.020.02631
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

Cyclin-E2 by CCDC83 expression — UCEC

Box plot of Cyclin-E2 in CCDC83-low vs CCDC83-high samples in UCEC.

Explore this box plot interactively →

Exploration