CCDC68

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC68 protein abundance is significantly associated with the RNA expression of many other genes, with 2,071 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CCDC68-associated genes across cancer lineages are ARHGAP18, MFNG, and MS4A4A. Each is linked with CCDC68 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC68-to-partner and partner-to-CCDC68 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC68 versus ARHGAP18 in CCRCC, with a Pearson correlation of 0.64.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC68→partner) and Y-score (partner→CCDC68) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCARHGAP18 →+0.705+0.681<.001<.00133
CCRCCMFNG →+0.708+0.858.001<.00132
CCRCCMS4A4A →+0.880+0.562.005.00932
CCRCCCARD6 →+0.963+0.765<.001<.00132
CCRCCLYVE1 →+1.125+0.527.001<.00132
CCRCCVSIG4 →+1.534+0.558.002.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,071 associations by consensus.

CCDC68 vs ARHGAP18 — CCRCC

Per-sample scatter of CCDC68 vs ARHGAP18 in CCRCC (Pearson r = 0.64).

Explore this scatter interactively →

Exploration