CCDC68

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC68 mutation is significantly associated with the RNA expression of many other genes, with 2,752 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CCDC68-associated genes across cancer lineages are DSCR4, OR1B1, and RRP9. Each is linked with CCDC68 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC68-to-partner and partner-to-CCDC68 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DSCR4 grouped by CCDC68-low versus CCDC68-high in LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC68→partner) and Y-score (partner→CCDC68) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUSCDSCR4 →+0.690+3.920.002.00733
CESCOR1B1 →+0.042+7.584<.001<.00132
SKCMRRP9 →+0.492+3.227<.001<.00132
SKCMITGB1BP1 →+0.485+2.534<.001.00132
SKCMENPP2 →-1.419-2.897<.001.00132
UCECTCF19 →+0.692+2.329.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,752 associations by consensus.

DSCR4 by CCDC68 expression — LUSC

Box plot of DSCR4 in CCDC68-low vs CCDC68-high samples in LUSC.

Explore this box plot interactively →

Exploration