CCDC190

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC190 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,705 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CCDC190-associated proteins across cancer lineages are SLC9A3R1, GCLC, and NTRK2. Each is linked with CCDC190 in more than 3 cancer types. Because this analysis shows association rather than direction, both CCDC190-to-partner and partner-to-CCDC190 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC190→partner) and Y-score (partner→CCDC190) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSLC9A3R1 →+0.653+2.319<.001<.00134
LSCCGCLC →+0.766+2.036.003<.00134
LSCCNTRK2 →+0.988+1.300<.001.00133
LSCCPCYT2 →+0.217+1.491<.001<.00133
LSCCZYX →-0.330-2.249.001<.00133
HNSCTTLL12 →+0.468+2.394<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,705 associations by consensus.

Exploration