CCDC190

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC190 RNA expression is significantly associated with the go_rna of many other GO terms, with 1,550 significant associations in total. BONE shows the largest number of these associations.

The most reproducible CCDC190-associated GO terms across cancer lineages are Positive regulation of epithelial to mesenchymal transition, Positive regulation of cytoskeleton organization, and Positive regulation of integrin biosynthetic process. Each is linked with CCDC190 in more than 8 cancer types. Because this analysis shows association rather than direction, both CCDC190-to-partner and partner-to-CCDC190 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC190→partner) and Y-score (partner→CCDC190) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTPositive regulation of epithelial to mesenchymal transition →+0.105+1.233<.001.00639
BONEPositive regulation of cytoskeleton organization →+0.081+0.893<.001.00938
BREASTPositive regulation of integrin biosynthetic process →+0.759+1.182.004.00837
CNSPositive regulation of extracellular matrix organization →+0.089+0.605.001<.00137
BONERegulation of cell-matrix adhesion →+0.139+1.226<.001.00137
CNSCellular response to transforming growth factor beta stimulus →+0.080+0.717<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,550 associations by consensus.

Exploration