CCDC190

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CCDC190 mutation is significantly associated with the RNA expression of many other genes, with 9 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CCDC190-associated genes across cancer lineages are TEX101, PYDC2, and CDRT15L2. Each is linked with CCDC190 in more than 1 cancer types. Because this analysis shows association rather than direction, both CCDC190-to-partner and partner-to-CCDC190 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC190→partner) and Y-score (partner→CCDC190) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETEX101 →+0.228+3.708<.001.00431
LARGE_INTESTINEPYDC2 →+0.088+3.678<.001.00131
OVARYCDRT15L2 →+0.022+5.196<.001.00531
SKINRTL4 →+0.006+5.415<.001.00431
SKINTXNDC8 →+0.035+4.977<.001.00731
SKINRBMY1J →+0.006+4.977<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 9 associations by consensus.

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