CCDC120

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC120 protein abundance is significantly associated with the RNA expression of many other genes, with 6,213 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible CCDC120-associated genes across cancer lineages are SLC17A9, MAN2B1, and NEDD9. Each is linked with CCDC120 in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC120-to-partner and partner-to-CCDC120 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC120 versus SLC17A9 in LSCC, with a Pearson correlation of -0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC120→partner) and Y-score (partner→CCDC120) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSLC17A9 →-0.575-0.298<.001.00133
GBMMAN2B1 →-0.564-0.543<.001<.00133
CCRCCNEDD9 →-0.908-0.420.005<.00133
GBMLTBP2 →-1.102-0.484<.001.00533
UCECPLCL2 →-0.937-0.577.002<.00133
UCECCYP2U1 →-0.771-0.704<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,213 associations by consensus.

CCDC120 vs SLC17A9 — LSCC

Per-sample scatter of CCDC120 vs SLC17A9 in LSCC (Pearson r = -0.33).

Explore this scatter interactively →

Exploration