CBX6

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CBX6 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,798 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CBX6-associated proteins across cancer lineages are CEBPB, STXBP1, and MAP1A. Each is linked with CBX6 in more than 5 cancer types. Because this analysis shows association rather than direction, both CBX6-to-partner and partner-to-CBX6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CBX6 versus CEBPB in CCRCC, with a Pearson correlation of -0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CBX6→partner) and Y-score (partner→CBX6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCCEBPB →-0.448-0.428.006.00536
GBMSTXBP1 →+0.664+0.307.001.00836
GBMMAP1A →+0.394+0.362<.001<.00136
OVMAP2 →+0.638+0.734.002.00836
GBMZMYND11 →+0.293+0.382.002.00235
LSCCCBX6_S246 →+0.692+0.650<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,798 associations by consensus.

CBX6 vs CEBPB — CCRCC

Per-sample scatter of CBX6 vs CEBPB in CCRCC (Pearson r = -0.30).

Explore this scatter interactively →

Exploration