CBWD2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CBWD2 protein abundance is significantly associated with the RNA expression of many other genes, with 3,596 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CBWD2-associated genes across cancer lineages are GHET1, PPP1R32, and TMEM182. Each is linked with CBWD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both CBWD2-to-partner and partner-to-CBWD2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CBWD2 versus GHET1 in LSCC, with a Pearson correlation of 0.36.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CBWD2→partner) and Y-score (partner→CBWD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCGHET1 →+0.527+0.351<.001<.00132
UCECPPP1R32 →-1.045-0.515<.001.00832
UCECTMEM182 →+0.490+0.505.008.00732
HNSCRN7SKP43 →+0.410+0.918.007.00232
CCRCCC1orf21 →-1.147-0.846.005.00832
LUADGYPC →-0.423-0.252.003.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,596 associations by consensus.

CBWD2 vs GHET1 — LSCC

Per-sample scatter of CBWD2 vs GHET1 in LSCC (Pearson r = 0.36).

Explore this scatter interactively →

Exploration