CBL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CBL mutation is significantly associated with the RNA expression of many other genes, with 37 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CBL-associated genes across cancer lineages are OR1L3, IFNA7, and MYF6. Each is linked with CBL in more than 1 cancer types. Because this analysis shows association rather than direction, both CBL-to-partner and partner-to-CBL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR1L3 grouped by CBL-low versus CBL-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CBL→partner) and Y-score (partner→CBL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOR1L3 →+0.029+5.415<.001.00432
BLOOD_LeukemiaIFNA7 →+0.019+3.922<.001.00232
OESOPHAGUSMYF6 →+0.013+4.906<.001.00631
OESOPHAGUSOR4E2 →+0.133+4.906<.001.00631
OESOPHAGUSOR4E1 →+0.016+4.906<.001.00631
BREASTIL36A →+0.085+5.169<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

OR1L3 by CBL expression — SKIN

Box plot of OR1L3 in CBL-low vs CBL-high samples in SKIN.

Explore this box plot interactively →

Exploration