CATSPER3

Across TCGA cell cohorts, CATSPER3 RNA expression is significantly associated with the RNA expression of many other genes, with 7,894 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible CATSPER3-associated genes across cancer lineages are PCBD2, LEAP2, and BRD8. Each is linked with CATSPER3 in more than 12 cancer types. Because this analysis shows association rather than direction, both CATSPER3-to-partner and partner-to-CATSPER3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CATSPER3 versus PCBD2 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.59.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CATSPER3→partner) and Y-score (partner→CATSPER3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	PCBD2 →	+1.121	+0.481	.002	.001	1	13
LUNG_NSCLC_LUAD	LEAP2 →	+0.786	+0.345	<.001	<.001	3	8
LARGE_INTESTINE	BRD8 →	+1.261	+0.580	<.001	<.001	3	8
LARGE_INTESTINE	TBC1D9B →	+0.945	+0.617	<.001	<.001	3	7
BREAST	E4F1 →	+1.137	+0.473	<.001	.003	2	7
LARGE_INTESTINE	SLTM →	+0.908	+0.565	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,894 associations by consensus.

CATSPER3 vs PCBD2 — LUNG_NSCLC_LUSC

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