CAMTA1-IT1

Across TCGA patient cohorts, CAMTA1-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,181 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CAMTA1-IT1-associated proteins across cancer lineages are SCAMP2, RHOT1, and SMARCD1. Each is linked with CAMTA1-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CAMTA1-IT1-to-partner and partner-to-CAMTA1-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAMTA1-IT1 versus SCAMP2 in LSCC, with a Pearson correlation of -0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAMTA1-IT1→partner) and Y-score (partner→CAMTA1-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SCAMP2 →	-0.228	-0.558	.001	<.001	3	4
LSCC	RHOT1 →	+0.208	+0.415	<.001	.001	3	3
GBM	SMARCD1 →	+0.353	+0.803	<.001	<.001	3	3
HNSC	SSR3_S105 →	-0.611	-0.699	.001	.003	3	3
LSCC	MYEF2 →	+0.662	+0.532	.003	<.001	3	3
UCEC	ZNF346 →	+0.262	+0.624	.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,181 associations by consensus.

CAMTA1-IT1 vs SCAMP2 — LSCC

Explore this scatter interactively →