CAMTA1-IT1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, CAMTA1-IT1 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of CAMTA1-IT1’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where CAMTA1-IT1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types CAMTA1-IT1 is over-expressed in tumor, although a few such as KIRC and KICH show the opposite, repressed pattern.

COAD, UCEC, and KIRC are the cancer types where CAMTA1-IT1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in CAMTA1-IT1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADAllAll+0.399<.00110view →
UCECAllAll+0.361.0114view →
KIRCAllAll−0.089.0173view →
READAllAll+0.778.0022view →
THCAMaleIV+0.376.0072view →
LIHCAllAll+0.163.0372view →
KICHFemaleAll−0.326.0391view →
STADFemaleIII,IV−0.324.0051view →
KIRCFemaleIV+0.263.0361view →
KIRPAllAll−0.149.0261view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 9 lineages.

CAMTA1-IT1–COAD

Tumor-vs-normal expression box plot for CAMTA1-IT1 RNA in COAD.

Open the COAD breakdown →

Exploration